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  5. Lfl_g03119

Lfl_g03119


Description : not classified & original description: none


Gene families : OG0008277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03119
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Ala_g11236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10818 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g06658 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0024.g020367 No alias not classified & original description: CDS=38-2191 0.03 OrthoFinder output from all 47 species
Ceric.07G027900.1 Ceric.07G027900 not classified & original description: pacid=50626329... 0.09 OrthoFinder output from all 47 species
Cre01.g006150 ATSCO1/CPEF-G,... Elongation factor G, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g07414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_37293 No alias Elongation factor G-2, chloroplastic OS=Glycine max... 0.06 OrthoFinder output from all 47 species
Len_g07222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10435583g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10435660g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Nbi_g07287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20375 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37172 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo405094 No alias Elongation factor G-2, chloroplastic OS=Glycine max 0.06 OrthoFinder output from all 47 species
Spa_g16990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006415 translational termination IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 102 367
IPR032090 RF3_C 477 604
IPR004161 EFTu-like_2 404 470
No external refs found!