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  5. Ala_g22823

Ala_g22823


Description : snoRNP rRNA methylation complex assembly factor *(NUFIP) & original description: none


Gene families : OG0003682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g22823

Target Alias Description ECC score Gene Family Method Actions
Aop_g05716 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Aop_g08132 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Cba_g38684 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species
Ceric.10G029400.1 Ceric.10G029400 snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species
Dcu_g50146 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
GSVIVT01027215001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder output from all 47 species
Spa_g15180 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0005384 manganese ion transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0030026 cellular manganese ion homeostasis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055071 manganese ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!