Ala_g08012


Description : not classified & original description: none


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g08012
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Aev_g37451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12318 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Cba_g05855 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.1Z088200.1 Ceric.1Z088200 not classified & original description: pacid=50573450... 0.05 OrthoFinder output from all 47 species
Dac_g01643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g07190.1 LOC_Os12g07190 CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g10616 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09029 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g20411 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g17492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07739 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g01050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 275 316
IPR000644 CBS_dom 47 93
IPR000644 CBS_dom 215 261
IPR000644 CBS_dom 107 151
IPR000270 PB1_dom 395 476
No external refs found!