Aliases : NEF1
Description : exine patterning factor *(NEF1) & original description: none
Gene families : OG0004275 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004275_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ala_g06738 | |
Cluster | HCCA: Cluster_120 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00233120 | NEF1,... | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.04 | OrthoFinder output from all 47 species | |
AT5G13390 | NEF1 | no exine formation 1 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g087227 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aev_g03387 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0104.g044904 | NEF1 | exine patterning factor *(NEF1) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.1Z076600.1 | NEF1, Ceric.1Z076600 | exine patterning factor *(NEF1) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
Cre01.g018050 | NEF1 | Cell wall.sporopollenin.exine wall formation.NEF1 exine... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g04975 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ehy_g04037 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_19950 | NEF1 | exine patterning factor (NEF1) | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os11g32470.1 | NEF1, LOC_Os11g32470 | exine patterning factor (NEF1) | 0.06 | OrthoFinder output from all 47 species | |
Lfl_g02354 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_302207g0010 | NEF1 | exine patterning factor (NEF1) | 0.07 | OrthoFinder output from all 47 species | |
Mp1g01090.1 | NEF1 | exine patterning factor (NEF1) | 0.05 | OrthoFinder output from all 47 species | |
Pir_g10459 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g02407 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g033282.1.1 | NEF1, Solyc11g033282 | exine patterning factor (NEF1) | 0.07 | OrthoFinder output from all 47 species | |
Spa_g15321 | NEF1 | exine patterning factor *(NEF1) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0001181 | RNA polymerase I general transcription initiation factor activity | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006361 | transcription initiation at RNA polymerase I promoter | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
MF | GO:0019899 | enzyme binding | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0031267 | small GTPase binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
MF | GO:0051020 | GTPase binding | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0071702 | organic substance transport | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
MF | GO:0140223 | general transcription initiation factor activity | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |