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  5. Msp_g27376

Msp_g27376 (AP19)


Aliases : AP19

Description : small subunit sigma of AP-3 Golgi to vacuole cargo adaptor complex & original description: none


Gene families : OG0004438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g27376
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cre09.g394100 AP19 Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Ehy_g01910 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.06 OrthoFinder output from all 47 species
Gb_30890 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
LOC_Os03g59660.1 AP19, LOC_Os03g59660 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
MA_130401g0010 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Mp1g27490.1 AP19 small subunit sigma of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Sam_g49420 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.04 OrthoFinder output from all 47 species
Spa_g12216 AP19 small subunit sigma of AP-3 Golgi to vacuole cargo... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 51 190
No external refs found!