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Description : scaffold component *(Sec31) of coat protein complex & original description: none
Gene families : OG0003227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003227_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g15835 | |
| Cluster | HCCA: Cluster_16 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00111p00143180 | evm_27.TU.AmTr_v1... | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.06 | OrthoFinder output from all 47 species | |
| AT3G63460 | No alias | transducin family protein / WD-40 repeat family protein | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g011557 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g057724 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g07314 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22457 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g12879 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0231.g059267 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g56660 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G027200.1 | Ceric.02G027200 | scaffold component *(Sec31) of coat protein complex &... | 0.08 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001154.3 | No alias | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001154.4 | No alias | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g522450 | No alias | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g21507 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g03156 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.1 | OrthoFinder output from all 47 species | |
| Ehy_g21292 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01001441001 | No alias | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_38895 | No alias | scaffolding component Sec31 of coat protein complex | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os07g46370.1 | LOC_Os07g46370 | scaffolding component Sec31 of coat protein complex | 0.04 | OrthoFinder output from all 47 species | |
| Len_g13782 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g04962 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.1 | OrthoFinder output from all 47 species | |
| MA_57417g0010 | No alias | scaffolding component Sec31 of coat protein complex | 0.04 | OrthoFinder output from all 47 species | |
| Mp7g09730.1 | No alias | scaffolding component Sec31 of coat protein complex | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g04454 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g03111 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g13045 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g32771 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0068.g016440 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0068.g016441 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g25577 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g51160 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Smo230767 | No alias | Vesicle trafficking.Coat protein II (COPII) coatomer... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g088020.3.1 | Solyc01g088020 | scaffolding component Sec31 of coat protein complex | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g11489 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g14980 | No alias | scaffold component *(Sec31) of coat protein complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e010894_P003 | Zm00001e010894 | scaffolding component Sec31 of coat protein complex | 0.14 | OrthoFinder output from all 47 species | |
| Zm00001e035747_P003 | Zm00001e035747 | scaffolding component Sec31 of coat protein complex | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | HCCA |
| MF | GO:0004743 | pyruvate kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006486 | protein glycosylation | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| CC | GO:0030131 | clathrin adaptor complex | IEP | HCCA |
| MF | GO:0030955 | potassium ion binding | IEP | HCCA |
| MF | GO:0031420 | alkali metal ion binding | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0070085 | glycosylation | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024298 | ACE1_Sec16_Sec31 | 570 | 762 |
| No external refs found! |