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  5. Msp_g15210

Msp_g15210 (MSL5)


Aliases : MSL5

Description : mechanosensitive ion channel *(MSL) & original description: none


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g15210
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT2G17010 No alias Mechanosensitive ion channel family protein 0.03 OrthoFinder output from all 47 species
Als_g01071 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036428 MSL5 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Cba_g03379 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G069800.1 MSL5, Ceric.22G069800 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Dac_g12993 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g32324 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008726001 No alias Solute transport.channels.MSL mechanosensitive ion channel 0.02 OrthoFinder output from all 47 species
GSVIVT01035448001 MSL10, ATMSL10 Solute transport.channels.MSL mechanosensitive ion channel 0.03 OrthoFinder output from all 47 species
Nbi_g07829 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10135 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
CC GO:0097526 spliceosomal tri-snRNP complex IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 700 872
No external refs found!