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  5. Msp_g12207

Msp_g12207 (CPSRP43, CAO)


Aliases : CPSRP43, CAO

Description : component *(cpSRP43) of thylakoid membrane SRP insertion system & original description: none


Gene families : OG0007162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g12207

Target Alias Description ECC score Gene Family Method Actions
AT2G47450 CPSRP43, CAO chloroplast signal recognition particle component (CAO) 0.04 OrthoFinder output from all 47 species
Aev_g05408 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene27054.t1 CPSRP43, CAO,... component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Cba_g41859 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Ceric.38G054000.1 CPSRP43, CAO,... component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Cre04.g231026 CPSRP43, CAO Protein translocation.chloroplast.thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Dcu_g39238 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Dde_g17031 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Gb_07319 CPSRP43, CAO component cpSRP43 of thylakoid membrane SRP insertion system 0.03 OrthoFinder output from all 47 species
LOC_Os03g03990.1 CPSRP43, CAO,... component cpSRP43 of thylakoid membrane SRP insertion system 0.04 OrthoFinder output from all 47 species
MA_845170g0010 No alias component cpSRP43 of thylakoid membrane SRP insertion system 0.02 OrthoFinder output from all 47 species
Mp2g09760.1 CPSRP43, CAO component cpSRP43 of thylakoid membrane SRP insertion system 0.05 OrthoFinder output from all 47 species
Ore_g21609 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Ore_g41563 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Pir_g17134 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Ppi_g03789 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000104 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.02 OrthoFinder output from all 47 species
Solyc02g087400.1.1 CPSRP43, CAO,... component cpSRP43 of thylakoid membrane SRP insertion system 0.05 OrthoFinder output from all 47 species
Spa_g13003 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 177 268
IPR023780 Chromo_domain 315 359
No external refs found!