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  5. Msp_g10988

Msp_g10988


Description : solute transporter *(MTCC) & original description: none


Gene families : OG0009597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g10988
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Aob_g12819 ATBT1, EMB42,... solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09889 No alias solute transporter *(MTCC) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.18G032100.1 Ceric.18G032100 solute transporter *(MTCC) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g31312 No alias solute transporter *(MTCC) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06928 No alias solute transporter *(MTCC) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g06814 No alias solute transporter *(MTCC) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016545 ATBT1, EMB42,... solute transporter *(MTCC) & original description: CDS=390-2147 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1739.g028134 ATBT1, EMB42,... solute transporter *(MTCC) & original description: CDS=1-1332 0.04 OrthoFinder output from all 47 species
Spa_g50569 No alias solute transporter *(MTCC) & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g39976 No alias solute transporter *(MTCC) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 95 157
IPR018108 Mitochondrial_sb/sol_carrier 384 468
IPR018108 Mitochondrial_sb/sol_carrier 476 567
IPR018108 Mitochondrial_sb/sol_carrier 287 375
No external refs found!