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Heatmap: Cluster_34 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Rhizome
Root
1.36 -1.05 0.69 -1.18 0.23 -0.81 -2.7
1.5 -1.03 0.65 -0.98 -0.01 -1.41 -2.11
Msp_g00147 (PSAK)
 1.52 -1.02 0.88 -1.28 -0.02 -1.63 -3.83
0.97 -0.24 0.31 -0.35 0.0 -0.56 -1.05
1.23 -0.76 0.37 -0.75 -0.06 -0.46 -1.04
0.82 -0.33 0.41 -0.31 0.0 -0.6 -0.64
0.76 -0.26 0.18 -0.28 0.02 -0.31 -0.52
0.8 -0.36 0.11 -0.42 -0.01 -0.27 -0.27
Msp_g01373 (SEP1)
 1.11 -0.42 0.24 -0.4 -0.15 -0.42 -0.97
Msp_g01885 (NSI)
 1.41 -0.7 0.07 -0.88 0.27 -0.78 -1.53
Msp_g02016 (ATAB2)
 0.83 -0.55 0.14 -0.3 0.2 -0.36 -0.54
1.38 -0.98 0.73 -0.95 -0.16 -1.14 -1.48
Msp_g02196 (PSBR)
 1.66 -1.15 1.06 -1.36 -0.6 -2.33 -4.07
Msp_g02710 (LHCA3)
 1.64 -1.29 0.83 -1.53 -0.06 -1.64 -3.91
Msp_g03092 (TLP18.3)
 1.47 -0.66 0.89 -0.85 -0.48 -1.69 -2.58
1.7 -1.53 0.7 -1.35 -0.27 -1.1 -3.37
Msp_g04644 (OE23)
 1.49 -0.81 0.77 -0.99 -0.01 -1.52 -3.85
Msp_g04666 (CAB4)
 1.71 -2.53 0.77 -3.04 0.29 -1.01 -6.24
Msp_g04774 (RSR4)
 1.09 -0.51 0.45 -0.58 -0.29 -0.71 -0.52
Msp_g04851 (NDF5)
 1.08 -0.28 0.33 -0.54 -0.05 -0.46 -1.23
1.78 -3.04 0.69 -3.01 0.4 -1.77 -3.42
Msp_g05321 (ATPD)
 1.43 -0.96 0.73 -0.9 -0.3 -0.99 -1.83
1.35 -0.67 0.27 -0.93 -0.01 -0.93 -0.78
Msp_g05868 (LHCA1)
 1.35 -1.32 0.57 -1.5 0.59 -1.02 -2.2
0.85 -0.39 0.25 -0.49 0.02 -0.36 -0.42
Msp_g06340 (CRM3)
 0.91 -0.44 0.44 -0.3 -0.01 -0.76 -0.66
1.04 -0.7 0.46 -0.74 0.32 -0.5 -1.31
1.3 -0.91 0.89 -1.02 0.24 -1.24 -4.17
1.29 -1.42 0.65 -1.45 0.27 -0.39 -1.81
0.87 -0.48 0.43 -0.57 0.17 -0.38 -0.85
Msp_g07421 (SIGB)
 0.59 -0.24 0.11 -0.19 0.24 -0.28 -0.54
1.34 -0.65 0.61 -0.72 -0.28 -1.05 -1.32
Msp_g07626 (PSAF)
 1.35 -1.51 0.79 -1.74 0.59 -1.05 -3.84
Msp_g07910 (SFD4)
 0.94 -0.67 0.24 -0.68 0.46 -0.41 -0.94
Msp_g07941 (LHCB4.2)
 1.62 -1.4 1.01 -1.71 -0.17 -1.74 -4.72
Msp_g08155 (LHCB3)
 1.37 -1.14 0.75 -1.31 0.29 -0.83 -3.45
Msp_g08351 (DEG8)
 1.1 -0.49 0.36 -0.39 -0.1 -0.79 -0.78
1.43 -0.76 0.81 -0.95 -0.4 -1.08 -2.18
1.59 -1.48 0.68 -1.63 -0.25 -0.75 -1.92
1.3 -0.71 0.3 -0.82 -0.02 -0.55 -1.13
Msp_g09623 (emb1473)
 1.01 -0.66 0.48 -0.73 0.5 -0.86 -1.36
1.48 -0.69 0.45 -1.41 -0.49 -0.75 -0.87
Msp_g09996 (APX6)
 0.78 -0.14 0.12 -0.37 0.1 -0.24 -0.75
1.63 -1.65 0.49 -1.61 -0.01 -0.88 -1.71
Msp_g10281 (YLMG2)
 1.15 -0.91 0.57 -0.81 0.48 -0.94 -1.87
1.21 -0.51 0.44 -0.55 -0.21 -0.85 -0.92
Msp_g10411 (ORF02)
 1.38 -0.79 0.5 -0.78 -0.16 -0.74 -1.63
0.91 -0.51 0.15 -0.64 0.28 -0.2 -0.79
Msp_g11190 (PSAE-2)
 1.63 -1.04 0.81 -1.22 -0.32 -1.58 -3.22
Msp_g11725 (OEC33)
 1.46 -1.32 0.9 -1.5 0.15 -1.27 -3.19
Msp_g11796 (LHCB5)
 1.61 -1.5 0.72 -1.81 0.15 -1.15 -3.44
Msp_g11813 (PGR1)
 1.48 -0.86 0.8 -0.96 -0.29 -1.39 -2.24
Msp_g12017 (PSB28)
 1.14 -0.92 0.52 -0.64 -0.08 -0.52 -0.84
Msp_g12150 (HCF101)
 1.29 -0.59 0.79 -0.67 -0.17 -1.17 -2.33
Msp_g12392 (OE23)
 1.27 -0.94 0.83 -1.12 0.2 -1.23 -2.02
1.55 -0.95 0.51 -1.01 -0.34 -0.62 -2.33
Msp_g12533 (TPT)
 0.69 -0.41 0.09 -0.41 0.22 -0.12 -0.44
Msp_g12987 (ATPC1)
 1.44 -0.93 0.87 -0.89 -0.42 -1.6 -1.64
Msp_g12997 (PSBY)
 1.61 -1.3 0.92 -1.59 -0.18 -1.87 -2.64
1.31 -0.75 0.68 -0.7 -0.31 -1.24 -1.07
Msp_g13414 (OVA2)
 0.75 -0.32 0.19 -0.32 0.18 -0.6 -0.37
Msp_g14107 (ISE2)
 1.22 -0.97 0.32 -1.09 0.22 -0.4 -0.96
Msp_g14136 (SPT)
 1.58 -0.84 0.65 -0.91 -0.54 -0.61 -8.01
1.21 -0.65 0.76 -0.65 -0.23 -1.07 -1.35
1.25 -0.58 0.43 -0.9 0.49 -1.11 -2.27
Msp_g18510 (PSB28)
 1.3 -0.56 0.14 -0.62 0.29 -1.2 -1.17
0.82 -0.44 0.22 -0.34 0.17 -0.3 -0.73
Msp_g19386 (PTAC5)
 0.99 -0.4 0.36 -0.28 0.06 -0.45 -1.37
Msp_g20236 (PSBW)
 1.39 -1.06 0.36 -1.01 0.32 -0.7 -2.04
Msp_g20237 (PSBW)
 1.75 -2.14 0.45 -2.12 0.34 -1.06 -4.11
Msp_g20762 (PTAC4)
 1.0 -0.65 0.3 -0.72 0.39 -0.37 -1.16
0.73 -0.18 0.14 -0.28 -0.14 -0.35 -0.25
Msp_g21035 (ATS)
 1.25 -0.96 0.59 -0.97 0.41 -0.76 -2.46
1.4 -0.83 0.58 -0.74 -0.09 -1.27 -1.5
Msp_g23904 (CSP41A)
 1.63 -2.4 1.01 -2.57 0.25 -1.62 -5.21
Msp_g23935 (AGY1)
 0.75 -0.42 0.22 -0.41 0.23 -0.25 -0.67
Msp_g25058 (EMB2761)
 0.96 -0.48 0.42 -0.52 -0.04 -0.63 -0.54
1.14 -0.63 0.34 -0.76 0.01 -0.31 -1.07
1.29 -0.85 0.47 -0.93 0.17 -0.72 -1.46
Msp_g25846 (PSAD-1)
 1.4 -0.88 0.81 -1.03 -0.09 -1.02 -2.83
Msp_g26192 (OHP2)
 1.14 -0.71 0.37 -0.74 -0.15 -0.71 -0.34
Msp_g32095 (STI)
 1.37 -1.04 0.49 -0.93 0.5 -1.18 -2.87
Msp_g32905 (PPH1)
 0.95 -0.43 0.34 -0.59 0.03 -0.73 -0.38
1.69 -0.78 0.68 -1.13 -0.74 -0.95 -8.56
Msp_g35384 (PSAH2)
 1.67 -1.28 0.66 -1.46 -0.13 -1.05 -3.86
Msp_g37293 (CcdA)
 1.13 -0.62 0.57 -0.61 -0.05 -0.78 -1.06
1.48 -1.12 0.76 -1.26 0.29 -1.79 -3.0
0.83 -0.35 0.17 -0.35 0.12 -0.54 -0.41
1.47 -2.0 0.5 -1.81 0.5 -0.97 -1.46
Msp_g44062 (PSAF)
 1.55 -2.04 0.78 -2.63 0.56 -1.24 -4.33
Msp_g48203 (LHB1B2)
 1.87 -1.47 0.54 -1.49 -0.19 -1.81 -6.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.