Msp_g01890 (ERD2B)


Aliases : ERD2B

Description : COPI trafficking K/HDEL-signature cargo receptor & original description: none


Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g01890
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Adi_g110140 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Ceric.08G005400.1 ERD2B, Ceric.08G005400 COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Cre01.g051400 ERD2B Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
Ehy_g03485 No alias COPI trafficking K/HDEL-signature cargo receptor &... 0.02 OrthoFinder output from all 47 species
LOC_Os11g28340.1 ERD2B, LOC_Os11g28340 ERD2 COPI trafficking K/HDEL-signature receptor 0.05 OrthoFinder output from all 47 species
Lfl_g00379 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species
Spa_g04912 ERD2B COPI trafficking K/HDEL-signature cargo receptor &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006621 protein retention in ER lumen IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0046923 ER retention sequence binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR000133 ER_ret_rcpt 28 171
No external refs found!