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  5. Msp_g00128

Msp_g00128


Description : lipoamide-containing component *(H-protein) of glycine cleavage system & original description: none


Gene families : OG0002114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g00128
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00054540 evm_27.TU.AmTr_v1... Photosynthesis.photorespiration.glycine cleavage... 0.12 OrthoFinder output from all 47 species
AT1G32470 No alias Single hybrid motif superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G35370 GDCH glycine decarboxylase complex H 0.07 OrthoFinder output from all 47 species
Adi_g019861 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Adi_g094450 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g102943 No alias lipoamide-containing component *(H-protein) of glycine... 0.08 OrthoFinder output from all 47 species
Aev_g23460 No alias lipoamide-containing component *(H-protein) of glycine... 0.1 OrthoFinder output from all 47 species
Ala_g16182 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Als_g00184 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Aob_g05607 GDCH lipoamide-containing component *(H-protein) of glycine... 0.03 OrthoFinder output from all 47 species
Aop_g01914 No alias lipoamide-containing component *(H-protein) of glycine... 0.14 OrthoFinder output from all 47 species
Azfi_s0093.g043340 No alias lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Cba_g14008 No alias lipoamide-containing component *(H-protein) of glycine... 0.06 OrthoFinder output from all 47 species
Ceric.01G108100.1 Ceric.01G108100 lipoamide-containing component *(H-protein) of glycine... 0.06 OrthoFinder output from all 47 species
Ceric.26G032600.1 Ceric.26G032600 lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000227.27 No alias Photosynthesis.photorespiration.glycine cleavage... 0.02 OrthoFinder output from all 47 species
Dac_g00295 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Dcu_g46571 No alias lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Dde_g02618 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Ehy_g00941 No alias lipoamide-containing component *(H-protein) of glycine... 0.03 OrthoFinder output from all 47 species
GSVIVT01013175001 No alias Photosynthesis.photorespiration.glycine cleavage... 0.09 OrthoFinder output from all 47 species
Gb_37034 GDCH lipoamide-containing component H-protein of glycine... 0.07 OrthoFinder output from all 47 species
LOC_Os10g37180.1 LOC_Os10g37180 lipoamide-containing component H-protein of glycine... 0.04 OrthoFinder output from all 47 species
Len_g25183 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
MA_20265g0010 No alias lipoamide-containing component H-protein of glycine... 0.06 OrthoFinder output from all 47 species
Mp3g05780.1 No alias lipoamide-containing component H-protein of glycine... 0.06 OrthoFinder output from all 47 species
Nbi_g01783 No alias lipoamide-containing component *(H-protein) of glycine... 0.1 OrthoFinder output from all 47 species
Pir_g02729 No alias lipoamide-containing component *(H-protein) of glycine... 0.08 OrthoFinder output from all 47 species
Pp3c19_11600V3.1 Pp3c19_11600 Single hybrid motif superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g08906 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Ppi_g14862 No alias lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006297 No alias lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Sam_g08374 No alias lipoamide-containing component *(H-protein) of glycine... 0.03 OrthoFinder output from all 47 species
Smo113331 No alias Photosynthesis.photorespiration.glycine cleavage... 0.03 OrthoFinder output from all 47 species
Solyc06g061070.3.1 Solyc06g061070 lipoamide-containing component H-protein of glycine... 0.03 OrthoFinder output from all 47 species
Spa_g12562 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Spa_g12563 No alias lipoamide-containing component *(H-protein) of glycine... 0.07 OrthoFinder output from all 47 species
Spa_g14635 No alias lipoamide-containing component *(H-protein) of glycine... 0.05 OrthoFinder output from all 47 species
Tin_g09642 No alias lipoamide-containing component *(H-protein) of glycine... 0.04 OrthoFinder output from all 47 species
Zm00001e025148_P001 Zm00001e025148 lipoamide-containing component H-protein of glycine... 0.02 OrthoFinder output from all 47 species
Zm00001e039579_P001 GDCH, Zm00001e039579 lipoamide-containing component H-protein of glycine... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR033753 GCV_H/Fam206 34 153
No external refs found!