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  5. Tin_g44935

Tin_g44935


Description : manganese/calcium cation transporter *(BICAT) & original description: none


Gene families : OG0000681 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000681_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44935

Target Alias Description ECC score Gene Family Method Actions
AT1G64150 No alias Uncharacterized protein family (UPF0016) 0.03 OrthoFinder output from all 47 species
Adi_g049937 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Aev_g02221 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Ala_g01521 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Aob_g39299 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G012000.1 Ceric.30G012000 manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Ceric.31G008500.1 Ceric.31G008500 manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Cre16.g660000 No alias Solute transport.carrier-mediated transport.PAM71... 0.03 OrthoFinder output from all 47 species
Dac_g31401 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g02423 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019449001 No alias Solute transport.carrier-mediated transport.PAM71... 0.03 OrthoFinder output from all 47 species
LOC_Os11g34180.1 LOC_Os11g34180 manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species
Len_g10003 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
Mp5g13170.1 No alias manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species
Ore_g06932 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Pir_g10173 No alias manganese/calcium cation transporter *(BICAT) & original... 0.04 OrthoFinder output from all 47 species
Pir_g29926 No alias manganese/calcium cation transporter *(BICAT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000946 No alias manganese/calcium cation transporter *(BICAT) & original... 0.02 OrthoFinder output from all 47 species
Solyc08g081770.3.1 Solyc08g081770 manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species
Solyc09g091240.4.1 Solyc09g091240 manganese/calcium cation transporter (BICAT) 0.04 OrthoFinder output from all 47 species
Spa_g09226 No alias manganese/calcium cation transporter *(BICAT) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e008707_P003 Zm00001e008707 manganese/calcium cation transporter (BICAT) 0.02 OrthoFinder output from all 47 species
Zm00001e026075_P001 Zm00001e026075 manganese/calcium cation transporter (BICAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001727 Gdt1 236 320
IPR001727 Gdt1 363 437
No external refs found!