1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g43677

Tin_g43677


Description : not classified & original description: none


Gene families : OG0004730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004730_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g43677
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
AT1G30580 No alias GTP binding 0.03 OrthoFinder output from all 47 species
Aev_g01010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0078.g038274 No alias not classified & original description: CDS=221-1405 0.03 OrthoFinder output from all 47 species
Cba_g03894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.92 No alias Obg-like ATPase 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cre02.g104900 No alias Obg-like ATPase 1 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder output from all 47 species
Dcu_g02850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g09940.1 LOC_Os08g09940 Obg-like ATPase 1 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
Len_g09414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g19640.1 No alias Obg-like ATPase 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Nbi_g04134 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc02g023970.3.1 Solyc02g023970 Obg-like ATPase 1 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Spa_g19285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039990_P002 Zm00001e039990 Obg-like ATPase 1 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0002161 aminoacyl-tRNA editing activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013029 YchF_C 311 394
IPR006073 GTP-bd 33 145
No external refs found!