Aliases : TMN1, AtTMN1
Description : not classified & original description: none
Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g14792 | |
Cluster | HCCA: Cluster_181 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G08350 | No alias | Endomembrane protein 70 protein family | 0.02 | OrthoFinder output from all 47 species | |
AT1G14670 | No alias | Endomembrane protein 70 protein family | 0.02 | OrthoFinder output from all 47 species | |
Adi_g057368 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g03157 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g32517 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aop_g03806 | TMN1, AtTMN1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Azfi_s0509.g074704 | TMN1, AtTMN1 | not classified & original description: CDS=1-1740 | 0.04 | OrthoFinder output from all 47 species | |
Cba_g26284 | TMN1, AtTMN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.10G052300.1 | Ceric.10G052300 | not classified & original description: pacid=50613376... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.22G054000.1 | Ceric.22G054000 | not classified & original description: pacid=50613875... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.34G054800.1 | TMN1, AtTMN1,... | not classified & original description: pacid=50624162... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000459.14 | No alias | Transmembrane 9 superfamily member 3 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000459.15 | No alias | Transmembrane 9 superfamily member 4 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020780.24 | No alias | Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cre01.g024350 | No alias | Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cre14.g611850 | TMN1, AtTMN1 | Transmembrane 9 superfamily member 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Cre16.g675958 | No alias | Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Dac_g03775 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g08865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g10047 | TMN1, AtTMN1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g10048 | TMN1, AtTMN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g09821 | TMN1, AtTMN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01011574001 | No alias | Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g34690.1 | TMN1, AtTMN1,... | Transmembrane 9 superfamily member 1 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g13380.1 | LOC_Os03g13380 | Transmembrane 9 superfamily member 3 OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os11g07910.1 | TMN1, AtTMN1,... | Transmembrane 9 superfamily member 1 OS=Arabidopsis... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os12g07670.1 | TMN1, AtTMN1,... | Transmembrane 9 superfamily member 1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
Len_g05429 | TMN1, AtTMN1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Len_g07740 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g05549 | TMN1, AtTMN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10431134g0010 | TMN1, AtTMN1 | Transmembrane 9 superfamily member 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Mp3g06160.1 | No alias | Transmembrane 9 superfamily member 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g10835 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g02238 | TMN1, AtTMN1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g06247 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g06736 | TMN1, AtTMN1 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Nbi_g13690 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g06802 | TMN1, AtTMN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g13530 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g19351 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g45907 | TMN1, AtTMN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g55432 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0112.g020786 | TMN1, AtTMN1 | not classified & original description: CDS=134-1804 | 0.02 | OrthoFinder output from all 47 species | |
Smo166118 | No alias | Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
Smo170330 | No alias | Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g014570.3.1 | Solyc04g014570 | Transmembrane 9 superfamily member 3 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g074310.4.1 | Solyc06g074310 | Transmembrane 9 superfamily member 5 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g17201 | TMN1, AtTMN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g19104 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g22300 | TMN1, AtTMN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g40885 | TMN1, AtTMN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g47696 | TMN1, AtTMN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g50972 | TMN1, AtTMN1 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e000978_P002 | Zm00001e000978 | Transmembrane 9 superfamily member 2 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e008994_P001 | TMN1, AtTMN1,... | Transmembrane 9 superfamily member 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014799_P002 | TMN1, AtTMN1,... | Transmembrane 9 superfamily member 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e018414_P001 | TMN1, AtTMN1,... | Transmembrane 9 superfamily member 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e039502_P001 | TMN1, AtTMN1,... | Transmembrane 9 superfamily member 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0003779 | actin binding | IEP | HCCA |
MF | GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
CC | GO:0005789 | endoplasmic reticulum membrane | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006417 | regulation of translation | IEP | HCCA |
BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
BP | GO:0006497 | protein lipidation | IEP | HCCA |
BP | GO:0006505 | GPI anchor metabolic process | IEP | HCCA |
BP | GO:0006506 | GPI anchor biosynthetic process | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
BP | GO:0006643 | membrane lipid metabolic process | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | HCCA |
BP | GO:0006664 | glycolipid metabolic process | IEP | HCCA |
BP | GO:0006694 | steroid biosynthetic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006810 | transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0007034 | vacuolar transport | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008202 | steroid metabolic process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
MF | GO:0016229 | steroid dehydrogenase activity | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
CC | GO:0019867 | outer membrane | IEP | HCCA |
CC | GO:0030117 | membrane coat | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
CC | GO:0031090 | organelle membrane | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
MF | GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
BP | GO:0034227 | tRNA thio-modification | IEP | HCCA |
BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
MF | GO:0043022 | ribosome binding | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | HCCA |
BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | HCCA |
BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051179 | localization | IEP | HCCA |
BP | GO:0051234 | establishment of localization | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0070001 | aspartic-type peptidase activity | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
BP | GO:1903509 | liposaccharide metabolic process | IEP | HCCA |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004240 | EMP70 | 103 | 597 |
No external refs found! |