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  5. Tin_g14496

Tin_g14496


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g14496

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00068p00173710 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G77145 No alias Protein of unknown function (DUF506) 0.03 OrthoFinder output from all 47 species
Adi_g060889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g31928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23855.t1 Aspi01Gene23855 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33568.t2 Aspi01Gene33568 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41331.t1 Aspi01Gene41331 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43866.t1 Aspi01Gene43866 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.05 OrthoFinder output from all 47 species
Ceric.13G087300.1 Ceric.13G087300 not classified & original description: pacid=50636452... 0.04 OrthoFinder output from all 47 species
Ceric.17G023400.1 Ceric.17G023400 not classified & original description: pacid=50618778... 0.03 OrthoFinder output from all 47 species
Ceric.38G003400.1 Ceric.38G003400 not classified & original description: pacid=50580583... 0.01 OrthoFinder output from all 47 species
Cre16.g693819 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g13363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g35422 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030534001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_30160 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_40428 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g11680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_29449g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_32290g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g09187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008363 No alias not classified & original description: CDS=285-1409 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014461 No alias not classified & original description: CDS=1-1647 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020224 No alias not classified & original description: CDS=806-2086 0.03 OrthoFinder output from all 47 species
Sam_g11927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g06813 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019800_P002 Zm00001e019800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 110 313
No external refs found!