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  5. Tin_g09845

Tin_g09845 (ATEXO70A1, EXO70A1)


Aliases : ATEXO70A1, EXO70A1

Description : component *(EXO70) of Exocyst complex & original description: none


Gene families : OG0000116 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000116_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g09845

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00198120 ATEXO70F1,... Vesicle trafficking.target membrane tethering.Exocyst... 0.03 OrthoFinder output from all 47 species
Adi_g076958 ATEXO70A1, EXO70A1 component *(EXO70) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Als_g06945 EXO70D3, ATEXO70D3 component *(EXO70) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46580.t1 EXO70D1,... component *(EXO70) of Exocyst complex & original... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000145.20 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os04g58870.1 ATEXO70A1,... component EXO70 of Exocyst complex 0.02 OrthoFinder output from all 47 species
Len_g17554 ATEXO70A1, EXO70A1 component *(EXO70) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04039 ATEXO70A1, EXO70A1 component *(EXO70) of Exocyst complex & original... 0.02 OrthoFinder output from all 47 species
Tin_g06342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA Interproscan
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEA Interproscan
BP GO:0006887 exocytosis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003855 3-dehydroquinate dehydratase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0032422 purine-rich negative regulatory element binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR046364 Exo70_C 275 633
No external refs found!