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  5. Tin_g02195

Tin_g02195 (EST3, MRP4, ATMRP4, ABCC4)


Aliases : EST3, MRP4, ATMRP4, ABCC4

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02195

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0035.g025598 AtABCC2, ABCC2,... glutathione S-conjugate transporter & original... 0.03 OrthoFinder output from all 47 species
Dac_g39648 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g40707 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24095 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g04046 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g08560.1 MRP11, ABCC13,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
MA_10434414g0010 ABCC1, ATABCC1,... ABC transporter C family member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10434717g0010 ATABCC5, MRP5,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
MA_685468g0010 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g03844 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20671 MRP10, ATMRP10, ABCC14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37642 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63153 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020291 ABCC12, MRP13, ATMRP13 glutathione S-conjugate transporter & original... 0.03 OrthoFinder output from all 47 species
Smo267271 ATABCC5, MRP5,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc08g081890.4.1 ATMRP14, ABCC10,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species
Solyc12g036160.3.1 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g04417 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006905_P001 AtABCC2, ABCC2,... subfamily ABCC transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004512 inositol-3-phosphate synthase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006021 inositol biosynthetic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 319 585
IPR011527 ABC1_TM_dom 959 1194
IPR003439 ABC_transporter-like_ATP-bd 650 782
IPR003439 ABC_transporter-like_ATP-bd 1290 1438
No external refs found!