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  5. Pir_g59758

Pir_g59758


Description : regulatory factor *(RIQ) of thylakoid grana stacking & original description: none


Gene families : OG0004759 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004759_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g59758
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00154p00066950 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G08050 No alias Protein of unknown function (DUF1118) 0.09 OrthoFinder output from all 47 species
Adi_g021665 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Adi_g046840 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Aev_g00608 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aev_g10172 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ala_g00963 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Als_g04124 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Aob_g09320 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aob_g42691 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Aop_g09516 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.15 OrthoFinder output from all 47 species
Aspi01Gene19483.t1 Aspi01Gene19483 regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene44811.t1 Aspi01Gene44811 regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Azfi_s0038.g026304 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Cba_g04313 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Ceric.34G020000.1 Ceric.34G020000 regulatory factor *(RIQ) of thylakoid grana stacking &... 0.13 OrthoFinder output from all 47 species
Dac_g00528 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.13 OrthoFinder output from all 47 species
Dcu_g47527 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Dde_g01981 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.14 OrthoFinder output from all 47 species
Ehy_g02092 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
GSVIVT01008106001 No alias No description available 0.15 OrthoFinder output from all 47 species
Gb_03565 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g38640.1 LOC_Os12g38640 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g11447 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.17 OrthoFinder output from all 47 species
Len_g44742 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Lfl_g03718 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
MA_114154g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g29140.1 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Msp_g08411 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.14 OrthoFinder output from all 47 species
Nbi_g08483 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Ore_g09667 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Pnu_g10046 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018867 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Sam_g23850 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Smo415599 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g03718 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.15 OrthoFinder output from all 47 species
Spa_g04667 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Tin_g15216 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Zm00001e002989_P001 Zm00001e002989 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0030091 protein repair IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR009500 DUF1118 139 251
No external refs found!