Aliases : HAT22
Description : HD-ZIP I/II-type transcription factor & original description: none
Gene families : OG0000538 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000538_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00019p00245530 | HAT9,... | No description available | 0.03 | OrthoFinder output from all 47 species | |
AT1G70920 | HB18, ATHB18 | homeobox-leucine zipper protein 18 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g048337 | HB-2, ATHB2, ATHB-2, HAT4 | HD-ZIP I/II-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000622 | HAT14 | HD-ZIP I/II-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Gb_03793 | HAT14 | transcription factor (HD-ZIP I/II) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g04870.1 | HB4, ATHB-4,... | transcription factor (HD-ZIP I/II) | 0.02 | OrthoFinder output from all 47 species | |
MA_860238g0010 | HB-2, ATHB2, ATHB-2, HAT4 | transcription factor (HD-ZIP I/II) | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0021.g008373 | HAT14 | not classified & original description: CDS=1-423 | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0142.g022808 | HAT14 | HD-ZIP I/II-type transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
Solyc05g008050.3.1 | ATHB17, HB17,... | transcription factor (HD-ZIP I/II) | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g060830.3.1 | HB-2, ATHB2,... | transcription factor (HD-ZIP I/II) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e007343_P003 | HB-2, ATHB2,... | transcription factor (HD-ZIP I/II) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e030251_P001 | HAT9, Zm00001e030251 | transcription factor (HD-ZIP I/II) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e038644_P001 | HAT22, Zm00001e038644 | transcription factor (HD-ZIP I/II) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
MF | GO:0043565 | sequence-specific DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
CC | GO:0005730 | nucleolus | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | HCCA |
CC | GO:0030684 | preribosome | IEP | HCCA |
CC | GO:0030686 | 90S preribosome | IEP | HCCA |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |