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  5. Pir_g41074

Pir_g41074 (ATCSN2, CSN2, FUS12, COP12)


Aliases : ATCSN2, CSN2, FUS12, COP12

Description : component *(CSN2) of COP9 signalosome complex & original description: none


Gene families : OG0004084 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004084_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g41074

Target Alias Description ECC score Gene Family Method Actions
Als_g12544 ATCSN2, CSN2,... component *(CSN2) of COP9 signalosome complex & original... 0.03 OrthoFinder output from all 47 species
Als_g12545 ATCSN2, CSN2,... component *(CSN2) of COP9 signalosome complex & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021435.13 ATCSN2, CSN2,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021435.14 ATCSN2, CSN2,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Cre01.g030800 ATCSN2, CSN2,... Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.04 OrthoFinder output from all 47 species
Dac_g23103 ATCSN2, CSN2,... component *(CSN2) of COP9 signalosome complex & original... 0.04 OrthoFinder output from all 47 species
Tin_g04594 ATCSN2, CSN2,... component *(CSN2) of COP9 signalosome complex & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP HCCA
CC GO:0000445 THO complex part of transcription export complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 306 409
No external refs found!