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  5. Pir_g38821

Pir_g38821


Description : not classified & original description: none


Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38821
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AT2G40400 No alias Protein of unknown function (DUF399 and DUF3411) 0.06 OrthoFinder output from all 47 species
Aev_g02433 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g02541 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g34117 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g01529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06534.t1 Aspi01Gene06534 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0006.g010109 No alias not classified & original description: CDS=336-1601 0.02 OrthoFinder output from all 47 species
Cba_g03217 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ceric.22G078500.1 Ceric.22G078500 not classified & original description: pacid=50614469... 0.06 OrthoFinder output from all 47 species
Ceric.29G029100.1 Ceric.29G029100 not classified & original description: pacid=50624979... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021617.18 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g18040 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02819 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g06291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11697 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g22985 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01032197001 No alias Protein RETICULATA-RELATED 4, chloroplastic... 0.06 OrthoFinder output from all 47 species
LOC_Os01g61120.1 LOC_Os01g61120 Protein RETICULATA-RELATED 6, chloroplastic... 0.09 OrthoFinder output from all 47 species
Len_g11651 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Len_g18505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35960 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g12361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02954 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g11767 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g20912 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g37256 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g08153 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g57518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012586 No alias not classified & original description: CDS=235-2685 0.05 OrthoFinder output from all 47 species
Sam_g08338 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g22685 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g35505 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo177305 No alias Protein RETICULATA-RELATED 5, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc01g087750.4.1 Solyc01g087750 Protein RETICULATA-RELATED 4, chloroplastic... 0.11 OrthoFinder output from all 47 species
Solyc06g050620.3.1 Solyc06g050620 Protein RETICULATA-RELATED 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
Spa_g07578 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g52655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19385 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e018574_P001 Zm00001e018574 Protein RETICULATA-RELATED 4, chloroplastic... 0.05 OrthoFinder output from all 47 species
Zm00001e019415_P003 Zm00001e019415 Protein RETICULATA-RELATED 6, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003951 NAD+ kinase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006741 NADP biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019363 pyridine nucleotide biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021825 RETICULATA-related 221 398
No external refs found!