1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g20413

Pir_g20413


Description : stromal processing peptidase *(SPP) & original description: none


Gene families : OG0003902 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003902_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g20413

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00070510 evm_27.TU.AmTr_v1... Protein modification.peptide maturation.plastid.SPP... 0.05 OrthoFinder output from all 47 species
AT5G42390 No alias Insulinase (Peptidase family M16) family protein 0.03 OrthoFinder output from all 47 species
Adi_g114940 No alias stromal processing peptidase *(SPP) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g03392 No alias stromal processing peptidase *(SPP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13801 No alias stromal processing peptidase *(SPP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013574 No alias stromal processing peptidase *(SPP) & original... 0.07 OrthoFinder output from all 47 species
Ceric.06G019300.1 Ceric.06G019300 stromal processing peptidase *(SPP) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g02014 No alias stromal processing peptidase *(SPP) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g00964 No alias stromal processing peptidase *(SPP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013468001 No alias Protein modification.peptide maturation.plastid.SPP... 0.04 OrthoFinder output from all 47 species
LOC_Os06g41990.1 LOC_Os06g41990 stromal processing peptidase (SPP) 0.03 OrthoFinder output from all 47 species
Len_g15346 No alias stromal processing peptidase *(SPP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_12095g0010 No alias stromal processing peptidase (SPP) 0.05 OrthoFinder output from all 47 species
MA_298732g0010 No alias Stromal processing peptidase, chloroplastic... 0.03 OrthoFinder output from all 47 species
MA_407396g0010 No alias Stromal processing peptidase, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp3g04410.1 No alias stromal processing peptidase (SPP) 0.03 OrthoFinder output from all 47 species
Nbi_g01474 No alias stromal processing peptidase *(SPP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14610 No alias stromal processing peptidase *(SPP) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440740 No alias Protein modification.peptide maturation.plastid.SPP... 0.04 OrthoFinder output from all 47 species
Solyc03g118430.3.1 Solyc03g118430 stromal processing peptidase (SPP) 0.04 OrthoFinder output from all 47 species
Zm00001e037546_P001 Zm00001e037546 stromal processing peptidase (SPP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0004832 valine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006438 valyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007863 Peptidase_M16_C 360 597
IPR007863 Peptidase_M16_C 933 1153
IPR011765 Pept_M16_N 209 342
No external refs found!