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  5. Pir_g19617

Pir_g19617


Description : not classified & original description: none


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19617

Target Alias Description ECC score Gene Family Method Actions
AT2G05230 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 OrthoFinder output from all 47 species
AT2G05250 No alias DNAJ heat shock N-terminal domain-containing protein 0.02 OrthoFinder output from all 47 species
Ala_g11765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19960 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013048001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01030061001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g28310.1 LOC_Os03g28310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g19008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434613g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g27530.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g06588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004721 No alias not classified & original description: CDS=1-2922 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005157 No alias not classified & original description: CDS=1-1251 0.04 OrthoFinder output from all 47 species
Sam_g11856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g040050.3.1 Solyc05g040050 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g047690.1.1 Solyc07g047690 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 67 124
IPR024593 DUF3444 744 942
No external refs found!