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  5. Pir_g19507

Pir_g19507


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g19507

Target Alias Description ECC score Gene Family Method Actions
Adi_g012590 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g114117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16234 CRM3, HCF152 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15637 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g17571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0336.g065546 No alias not classified & original description: CDS=1-2493 0.03 OrthoFinder output from all 47 species
Cba_g25946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.03 OrthoFinder output from all 47 species
Dac_g23808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29928 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g15440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49332 CRM3, HCF152 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0032954 regulation of cytokinetic process IEP HCCA
BP GO:0032955 regulation of division septum assembly IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051301 cell division IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901891 regulation of cell septum assembly IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 256 307
IPR002885 Pentatricopeptide_repeat 441 462
IPR002885 Pentatricopeptide_repeat 546 572
IPR002885 Pentatricopeptide_repeat 410 434
IPR002885 Pentatricopeptide_repeat 472 520
No external refs found!