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  5. Pir_g17134

Pir_g17134 (CPSRP43, CAO)


Aliases : CPSRP43, CAO

Description : component *(cpSRP43) of thylakoid membrane SRP insertion system & original description: none


Gene families : OG0007162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007162_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pir_g17134

Target Alias Description ECC score Gene Family Method Actions
AT2G47450 CPSRP43, CAO chloroplast signal recognition particle component (CAO) 0.03 OrthoFinder output from all 47 species
Aop_g04368 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species
Ceric.38G054000.1 CPSRP43, CAO,... component *(cpSRP43) of thylakoid membrane SRP insertion... 0.05 OrthoFinder output from all 47 species
Cre04.g231026 CPSRP43, CAO Protein translocation.chloroplast.thylakoid membrane SRP... 0.06 OrthoFinder output from all 47 species
Mp2g09760.1 CPSRP43, CAO component cpSRP43 of thylakoid membrane SRP insertion system 0.03 OrthoFinder output from all 47 species
Msp_g12207 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000104 CPSRP43, CAO component *(cpSRP43) of thylakoid membrane SRP insertion... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 190 279
No external refs found!