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  5. Pir_g05993

Pir_g05993


Description : 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) & original description: none


Gene families : OG0007059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g05993
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00096400 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder output from all 47 species
AT1G04620 No alias coenzyme F420 hydrogenase family / dehydrogenase, beta... 0.03 OrthoFinder output from all 47 species
Adi_g013357 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.05 OrthoFinder output from all 47 species
Gb_34355 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 OrthoFinder output from all 47 species
MA_6348739g0010 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 OrthoFinder output from all 47 species
MA_9928769g0020 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 OrthoFinder output from all 47 species
Spa_g25391 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007516 Co_F420_Hydgase/DH_bsu_N 124 199
IPR007525 FrhB_FdhB_C 208 360
No external refs found!