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  5. Len_g45581

Len_g45581


Description : component *(Tic62) of inner envelope TIC translocation system & original description: none


Gene families : OG0001315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g45581
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00166490 evm_27.TU.AmTr_v1... Protein translocation.chloroplast.inner envelope TIC... 0.08 OrthoFinder output from all 47 species
AT2G34460 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.1 OrthoFinder output from all 47 species
AT3G18890 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.11 OrthoFinder output from all 47 species
Adi_g056302 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g115349 TROL not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aev_g02963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19236 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15555 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Als_g27757 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Aob_g10014 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g08850 No alias component *(Tic62) of inner envelope TIC translocation... 0.1 OrthoFinder output from all 47 species
Aop_g26310 No alias not classified & original description: none 0.15 OrthoFinder output from all 47 species
Azfi_s0506.g073968 No alias component *(Tic62) of inner envelope TIC translocation... 0.05 OrthoFinder output from all 47 species
Cba_g34938 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Cba_g37473 No alias component *(Tic62) of inner envelope TIC translocation... 0.08 OrthoFinder output from all 47 species
Ceric.19G005700.1 Ceric.19G005700 not classified & original description: pacid=50575156... 0.03 OrthoFinder output from all 47 species
Ceric.1Z144700.1 Ceric.1Z144700 component *(Tic62) of inner envelope TIC translocation... 0.12 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.51 No alias Uncharacterized protein At2g34460, chloroplastic... 0.03 OrthoFinder output from all 47 species
Cre06.g269050 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
Dac_g06215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29054 No alias component *(Tic62) of inner envelope TIC translocation... 0.08 OrthoFinder output from all 47 species
Dac_g33065 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g10309 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g13303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00919 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g09011 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g16505 No alias component *(Tic62) of inner envelope TIC translocation... 0.06 OrthoFinder output from all 47 species
Ehy_g19385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021427001 No alias Uncharacterized protein At2g34460, chloroplastic... 0.02 OrthoFinder output from all 47 species
GSVIVT01031907001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.17 OrthoFinder output from all 47 species
LOC_Os10g01044.1 LOC_Os10g01044 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.02 OrthoFinder output from all 47 species
Lfl_g10375 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
MA_10429419g0010 No alias Protein TIC 62, chloroplastic OS=Pisum sativum... 0.04 OrthoFinder output from all 47 species
MA_332596g0010 No alias Uncharacterized protein At2g34460, chloroplastic... 0.05 OrthoFinder output from all 47 species
Msp_g09228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15467 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Msp_g19097 No alias component *(Tic62) of inner envelope TIC translocation... 0.22 OrthoFinder output from all 47 species
Nbi_g25487 No alias component *(Tic62) of inner envelope TIC translocation... 0.06 OrthoFinder output from all 47 species
Ore_g13449 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g32758 No alias component *(Tic62) of inner envelope TIC translocation... 0.06 OrthoFinder output from all 47 species
Pir_g19848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g64862 No alias component *(Tic62) of inner envelope TIC translocation... 0.03 OrthoFinder output from all 47 species
Pnu_g12655 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g16820 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007763 No alias not classified & original description: CDS=26-871 0.06 OrthoFinder output from all 47 species
Sam_g16016 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Sam_g16522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22704 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g35068 No alias component *(Tic62) of inner envelope TIC translocation... 0.04 OrthoFinder output from all 47 species
Sam_g35890 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc10g051110.1.1 Solyc10g051110 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.12 OrthoFinder output from all 47 species
Spa_g00929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06152 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Spa_g21915 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g38988 No alias component *(Tic62) of inner envelope TIC translocation... 0.07 OrthoFinder output from all 47 species
Zm00001e003804_P002 Zm00001e003804 Uncharacterized protein At2g34460, chloroplastic... 0.06 OrthoFinder output from all 47 species
Zm00001e011593_P001 Zm00001e011593 TIC62 protein involved in ferredoxin-NADP oxidoreductase... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051180 vitamin transport IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 185 342
No external refs found!