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  5. Len_g36322

Len_g36322 (SECA1, AtcpSecA, AGY1)


Aliases : SECA1, AtcpSecA, AGY1

Description : component *(SecA1) of thylakoid membrane Sec1 translocation system & original description: none


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g36322

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00116920 SECA1, AtcpSecA,... Protein translocation.chloroplast.thylakoid membrane... 0.1 OrthoFinder output from all 47 species
AT1G21650 SECA2 Preprotein translocase SecA family protein 0.03 OrthoFinder output from all 47 species
AT4G01800 SECA1, AtcpSecA, AGY1 Albino or Glassy Yellow 1 0.03 OrthoFinder output from all 47 species
Adi_g007063 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.08 OrthoFinder output from all 47 species
Aev_g01548 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ala_g03630 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Ala_g26842 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Als_g14938 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Aob_g02321 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Aop_g13757 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Aop_g60479 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.11 OrthoFinder output from all 47 species
Aspi01Gene56831.t1 SECA2, Aspi01Gene56831 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0155.g053632 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Cba_g17139 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ceric.02G067600.1 SECA1, AtcpSecA,... component *(SecA1) of thylakoid membrane Sec1... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.51 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.03 OrthoFinder output from all 47 species
Cre12.g517900 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.07 OrthoFinder output from all 47 species
Dac_g06495 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.08 OrthoFinder output from all 47 species
Dac_g06496 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.08 OrthoFinder output from all 47 species
Dcu_g05773 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.07 OrthoFinder output from all 47 species
Dde_g09974 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Dde_g13633 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ehy_g07099 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
GSVIVT01028249001 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.1 OrthoFinder output from all 47 species
Gb_00858 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_34931 SECA1, AtcpSecA, AGY1 component SecA1 of thylakoid membrane Sec1 translocation system 0.08 OrthoFinder output from all 47 species
LOC_Os01g21820.1 SECA1, AtcpSecA,... component SecA2 of inner envelope Sec2 post-import... 0.11 OrthoFinder output from all 47 species
Len_g01911 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Lfl_g02357 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
MA_304459g0010 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp5g09750.1 SECA1, AtcpSecA, AGY1 component SecA1 of thylakoid membrane Sec1 translocation system 0.05 OrthoFinder output from all 47 species
Msp_g23935 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Nbi_g15165 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Nbi_g30518 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.07 OrthoFinder output from all 47 species
Ore_g18515 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Pir_g06026 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Pnu_g06676 SECA2 component *(SecA2) of inner envelope Sec2 post-import... 0.03 OrthoFinder output from all 47 species
Ppi_g05317 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016761 SECA1, AtcpSecA, AGY1 channel-forming component *(Tim23) of inner... 0.05 OrthoFinder output from all 47 species
Sam_g15982 No alias component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Sam_g28166 No alias component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Smo156007 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.06 OrthoFinder output from all 47 species
Solyc01g080840.3.1 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.12 OrthoFinder output from all 47 species
Spa_g10168 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.11 OrthoFinder output from all 47 species
Spa_g17299 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Tin_g12949 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Zm00001e017535_P001 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR011116 SecA_Wing/Scaffold 796 1010
IPR011130 SecA_preprotein_X-link_dom 338 444
IPR011115 SecA_DEAD 120 488
No external refs found!