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  5. Len_g32053

Len_g32053


Description : not classified & original description: none


Gene families : OG0006377 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006377_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g32053

Target Alias Description ECC score Gene Family Method Actions
AT1G65230 No alias Uncharacterized conserved protein (DUF2358) 0.08 OrthoFinder output from all 47 species
Adi_g019793 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g09898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12629 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g21511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g16546 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22026 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11027 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.16G038200.1 Ceric.16G038200 not classified & original description: pacid=50589423... 0.08 OrthoFinder output from all 47 species
Ehy_g03299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01019072001 No alias No description available 0.09 OrthoFinder output from all 47 species
Gb_14335 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g68450.1 LOC_Os01g68450 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g11471 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Mp2g05350.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20995 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g36784 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18061 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g32523 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo83381 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc04g056580.3.1 Solyc04g056580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g56159 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e028504_P001 Zm00001e028504 component SNAPC3/SRD2 of SNAP snRNA transcription factor complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!