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  5. Len_g15104

Len_g15104


Description : not classified & original description: none


Gene families : OG0004629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004629_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15104
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Aob_g17054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre13.g562750 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01011490001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os05g43650.1 LOC_Os05g43650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g11299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g30984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28133 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070567 cytidylyltransferase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR025638 DUF4336 346 412
IPR025638 DUF4336 119 342
No external refs found!