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  5. Len_g14896

Len_g14896


Description : not classified & original description: none


Gene families : OG0008483 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g14896
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Adi_g018628 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g02320 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58266.t1 Aspi01Gene58266 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008132 No alias not classified & original description: CDS=109-1671 0.06 OrthoFinder output from all 47 species
Ceric.39G049100.1 Ceric.39G049100 not classified & original description: pacid=50583129... 0.06 OrthoFinder output from all 47 species
Msp_g47184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014167 No alias not classified & original description: CDS=261-1784 0.04 OrthoFinder output from all 47 species
Sam_g10588 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g10589 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11012 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035596 methylthiotransferase activity IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002792 TRAM_dom 452 516
IPR007197 rSAM 219 396
IPR013848 Methylthiotransferase_N 75 173
No external refs found!