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Description : not classified & original description: none
Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g14876 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g012590 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12875 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g16234 | CRM3, HCF152 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05987 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08020 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Aop_g15637 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g17571 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene16135.t1 | Aspi01Gene16135 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene48572.t1 | CRM3, HCF152,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024689 | No alias | not classified & original description: CDS=239-2569 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0336.g065546 | No alias | not classified & original description: CDS=1-2493 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g25946 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g57127 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.12G037000.1 | Ceric.12G037000 | not classified & original description: pacid=50600637... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.1Z219100.1 | Ceric.1Z219100 | not classified & original description: pacid=50617071... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16300 | CRM3, HCF152 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g23808 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g15035 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g23419 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g09268 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Dde_g29928 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g01887 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Lfl_g13127 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g06340 | CRM3, HCF152 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g13290 | EMB2279, EMB88 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g08780 | CRM3, HCF152 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g09299 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g21700 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g08308 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g14407 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g10297 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g42843 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0014.g006174 | No alias | not classified & original description: CDS=16-1263 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g15789 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37245 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g40231 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g15086 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g41235 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g49332 | CRM3, HCF152 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g12024 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g31150 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004820 | glycine-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006426 | glycyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016758 | hexosyltransferase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0019843 | rRNA binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |