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  5. Len_g12501

Len_g12501


Description : nascent polypeptide chaperone *(TIG) & original description: none


Gene families : OG0005980 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005980_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g12501

Target Alias Description ECC score Gene Family Method Actions
AT5G55220 No alias trigger factor type chaperone family protein 0.07 OrthoFinder output from all 47 species
Aev_g04634 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08766 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene66835.t1 Aspi01Gene66835 nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0226.g058982 No alias nascent polypeptide chaperone *(TIG) & original... 0.07 OrthoFinder output from all 47 species
Cba_g11734 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.28G003300.1 Ceric.28G003300 nascent polypeptide chaperone *(TIG) & original... 0.06 OrthoFinder output from all 47 species
Ceric.28G003400.1 Ceric.28G003400 nascent polypeptide chaperone *(TIG) & original... 0.05 OrthoFinder output from all 47 species
Cre01.g001750 No alias Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
Dac_g11398 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.14 OrthoFinder output from all 47 species
Dde_g13726 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03701 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01037722001 No alias Protein modification.protein folding and quality... 0.08 OrthoFinder output from all 47 species
LOC_Os06g20320.1 LOC_Os06g20320 nascent polypeptide chaperone (TF) 0.07 OrthoFinder output from all 47 species
Lfl_g01704 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429151g0010 No alias nascent polypeptide chaperone (TF) 0.08 OrthoFinder output from all 47 species
Mp4g08590.1 No alias nascent polypeptide chaperone (TF) 0.07 OrthoFinder output from all 47 species
Msp_g06456 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g11562 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.08 OrthoFinder output from all 47 species
Pnu_g14393 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29447 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013451 No alias EC_2.7 transferase transferring phosphorus-containing... 0.04 OrthoFinder output from all 47 species
Solyc07g064950.3.1 Solyc07g064950 nascent polypeptide chaperone (TF) 0.07 OrthoFinder output from all 47 species
Spa_g01344 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.13 OrthoFinder output from all 47 species
Tin_g07731 No alias nascent polypeptide chaperone *(TIG) & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051180 vitamin transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090482 vitamin transmembrane transporter activity IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008881 Trigger_fac_ribosome-bd_bac 86 227
IPR008880 Trigger_fac_C 367 525
No external refs found!