Len_g07985 (ATCBP80, ABH1, ENS, CBP80)

Aliases : ATCBP80, ABH1, ENS, CBP80

Description : component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex & original description: none

Gene families : OG0004633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004633_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g07985

Target	Alias	Description	ECC score	Gene Family Method
AT2G13540	ATCBP80, ABH1, ENS, CBP80	ARM repeat superfamily protein	0.04	OrthoFinder output from all 47 species
Ala_g18568	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.04	OrthoFinder output from all 47 species
Aob_g18677	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.03	OrthoFinder output from all 47 species
Cba_g03381	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.03	OrthoFinder output from all 47 species
Ceric.38G051300.1	ATCBP80, ABH1,...	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.07	OrthoFinder output from all 47 species
Cre12.g524100	No alias	RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA...	0.01	OrthoFinder output from all 47 species
Dcu_g08222	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.04	OrthoFinder output from all 47 species
LOC_Os03g22570.1	ATCBP80, ABH1,...	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.02	OrthoFinder output from all 47 species
Lfl_g02038	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.04	OrthoFinder output from all 47 species
MA_10436272g0010	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.03	OrthoFinder output from all 47 species
MA_13750g0010	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.03	OrthoFinder output from all 47 species
Mp1g05560.1	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.03	OrthoFinder output from all 47 species
Sam_g12525	No alias	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.02	OrthoFinder output from all 47 species
Sam_g28009	No alias	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.02	OrthoFinder output from all 47 species
Smo115849	ATCBP80, ABH1, ENS, CBP80	RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA...	0.03	OrthoFinder output from all 47 species
Solyc10g005530.3.1	ATCBP80, ABH1,...	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.04	OrthoFinder output from all 47 species
Spa_g26897	ATCBP80, ABH1, ENS, CBP80	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex...	0.05	OrthoFinder output from all 47 species
Zm00001e001643_P004	ATCBP80, ABH1,...	component CBP80 of CBP80-CBP20 mRNA Cap-Binding complex (CBC)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015172	MIF4G-like_typ-1	339	462
IPR003890	MIF4G-like_typ-3	32	201
IPR015174	MIF4G-like_typ-2	497	796

External Links

No external refs found!

Len_g07985 (ATCBP80, ABH1, ENS, CBP80)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation