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  5. Len_g06317

Len_g06317 (NDH-M)


Aliases : NDH-M

Description : component *(NdhM) of NDH subcomplex A & original description: none


Gene families : OG0008534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008534_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g06317
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT4G37925 NDH-M subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex 0.04 OrthoFinder output from all 47 species
Ala_g08918 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Als_g57438 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Aob_g02682 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Aop_g00976 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Cba_g11405 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ceric.24G022700.1 NDH-M, Ceric.24G022700 component *(NdhM) of NDH subcomplex A & original... 0.1 OrthoFinder output from all 47 species
Dac_g01225 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Dcu_g10850 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Dde_g47672 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01008801001 NDH-M Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 OrthoFinder output from all 47 species
LOC_Os04g45600.1 NDH-M, LOC_Os04g45600 component NdhM of NDH subcomplex A 0.05 OrthoFinder output from all 47 species
Mp8g09060.1 NDH-M component NdhM of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
Msp_g46696 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14325 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ore_g14021 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Pir_g58341 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Sam_g17340 No alias component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Sam_g17341 No alias component *(NdhM) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Smo125882 NDH-M Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.04 OrthoFinder output from all 47 species
Solyc04g057980.3.1 NDH-M, Solyc04g057980 component NdhM of NDH subcomplex A 0.04 OrthoFinder output from all 47 species
Spa_g49805 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.08 OrthoFinder output from all 47 species
Tin_g01519 NDH-M component *(NdhM) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Zm00001e007397_P001 NDH-M, Zm00001e007397 component NdhM of NDH subcomplex A 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR018922 NdhM 67 175
No external refs found!