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  5. Len_g04606

Len_g04606


Description : not classified & original description: none


Gene families : OG0000791 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000791_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g04606

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263410 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
AT2G39795 No alias Mitochondrial glycoprotein family protein 0.03 OrthoFinder output from all 47 species
AT3G55605 No alias Mitochondrial glycoprotein family protein 0.03 OrthoFinder output from all 47 species
AT5G02050 No alias Mitochondrial glycoprotein family protein 0.03 OrthoFinder output from all 47 species
Ala_g15202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00459 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056596 No alias not classified & original description: CDS=77-799 0.03 OrthoFinder output from all 47 species
Azfi_s0455.g071329 No alias not classified & original description: CDS=33-800 0.03 OrthoFinder output from all 47 species
Cba_g34398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G002400.1 Ceric.10G002400 not classified & original description: pacid=50611676... 0.03 OrthoFinder output from all 47 species
Ehy_g10441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016468001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
Gb_00756 No alias Uncharacterized protein At2g39795, mitochondrial... 0.01 OrthoFinder output from all 47 species
LOC_Os01g05010.1 LOC_Os01g05010 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
LOC_Os06g22070.1 LOC_Os06g22070 Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species
Lfl_g08735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_123491g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
Msp_g26913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023123 No alias not classified & original description: CDS=1-750 0.03 OrthoFinder output from all 47 species
Sam_g11538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g079930.3.1 Solyc03g079930 Uncharacterized protein At2g39795, mitochondrial... 0.02 OrthoFinder output from all 47 species
Solyc03g117080.4.1 Solyc03g117080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g065800.3.1 Solyc06g065800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g01691 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g09185 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e036951_P001 Zm00001e036951 Uncharacterized protein At2g39795, mitochondrial... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009349 riboflavin synthase complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003428 MAM33 89 271
No external refs found!