1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g01241

Len_g01241


Description : translation elongation factor *(EF-Tu) & original description: none


Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00115820 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
AT4G02930 No alias GTP binding Elongation factor Tu family protein 0.05 OrthoFinder output from all 47 species
Aop_g11193 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Cba_g07152 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Ceric.33G051100.1 Ceric.33G051100 translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g01379 No alias translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01011073001 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os03g63410.1 LOC_Os03g63410 EF-Tu translation elongation factor 0.03 OrthoFinder output from all 47 species
MA_58335g0010 No alias EF-Tu translation elongation factor 0.05 OrthoFinder output from all 47 species
Nbi_g01170 No alias translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Ore_g05800 No alias translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Sam_g24887 No alias translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g008940.4.1 Solyc06g008940 EF-Tu translation elongation factor 0.03 OrthoFinder output from all 47 species
Solyc09g073000.3.1 Solyc09g073000 EF-Tu translation elongation factor 0.03 OrthoFinder output from all 47 species
Spa_g01140 No alias translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Tin_g06040 No alias translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e006373_P001 Zm00001e006373 EF-Tu translation elongation factor 0.04 OrthoFinder output from all 47 species
Zm00001e011649_P001 Zm00001e011649 EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 357 450
IPR000795 T_Tr_GTP-bd_dom 66 259
IPR004161 EFTu-like_2 283 352
No external refs found!