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  5. Len_g01077

Len_g01077 (HCF164)


Aliases : HCF164

Description : protein involved in cytochrome b6/f complex assembly *(HCF164) & original description: none


Gene families : OG0006010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006010_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g01077
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00183340 HCF164,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
AT4G37200 HCF164 Thioredoxin superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g01048 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Als_g11520 HCF164 protein involved in cytochrome b6/f complex assembly... 0.05 OrthoFinder output from all 47 species
Aob_g01003 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Aop_g12552 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Azfi_s0092.g043076 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Ceric.29G044400.1 HCF164, Ceric.29G044400 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001264.18 HCF164 Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Dcu_g47105 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Dde_g01274 HCF164 protein involved in cytochrome b6/f complex assembly... 0.04 OrthoFinder output from all 47 species
Gb_14739 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.04 OrthoFinder output from all 47 species
Lfl_g02690 HCF164 protein involved in cytochrome b6/f complex assembly... 0.03 OrthoFinder output from all 47 species
Mp4g10810.1 HCF164 HCF164 protein involved in cytochrome b6/f complex assembly 0.02 OrthoFinder output from all 47 species
Pir_g14034 HCF164 protein involved in cytochrome b6/f complex assembly... 0.06 OrthoFinder output from all 47 species
Pp3c22_350V3.1 HCF164, Pp3c22_350 Thioredoxin superfamily protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 165 259
No external refs found!