Nbi_g07114 (ftsh9)

Aliases : ftsh9

Description : component *(FtsH7/9) of FtsH plastidial protease complexes & original description: none

Gene families : OG0003686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003686_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g07114
Cluster	HCCA: Cluster_170

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00219050	ftsh9,...	Protein degradation.peptidase families.metallopeptidase...	0.03	OrthoFinder output from all 47 species
Aev_g29610	ftsh7	component *(FtsH7/9) of FtsH plastidial protease...	0.02	OrthoFinder output from all 47 species
Aop_g10026	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Aspi01Gene13489.t1	ftsh9, Aspi01Gene13489	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g24054	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Dde_g27982	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.08	OrthoFinder output from all 47 species
Gb_07582	ftsh9	component FtsH7\|9 of FtsH plastidial protease complexes	0.03	OrthoFinder output from all 47 species
LOC_Os02g43350.1	ftsh7, LOC_Os02g43350	component FtsH7\|9 of FtsH plastidial protease complexes	0.04	OrthoFinder output from all 47 species
Len_g01388	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Pir_g20457	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Ppi_g56490	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0277.g027072	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.03	OrthoFinder output from all 47 species
Sam_g36797	No alias	component *(FtsH7/9) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species
Spa_g12633	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.05	OrthoFinder output from all 47 species
Tin_g11846	ftsh9	component *(FtsH7/9) of FtsH plastidial protease...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0004820	glycine-tRNA ligase activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006426	glycyl-tRNA aminoacylation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0017038	protein import	IEP	HCCA
MF	GO:0032977	membrane insertase activity	IEP	HCCA
CC	GO:0034357	photosynthetic membrane	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
CC	GO:0042651	thylakoid membrane	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140597	protein carrier chaperone	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000642	Peptidase_M41	654	840
IPR003959	ATPase_AAA_core	432	565
IPR041569	AAA_lid_3	590	632

External Links

No external refs found!

Nbi_g07114 (ftsh9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation