Nbi_g02879 (GATA15)

Aliases : GATA15

Description : transcription factor *(A/B-GATA) & original description: none

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g02879
Cluster	HCCA: Cluster_165

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00210810	GATA5,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00064p00107710	GATA22, CGA1,...	RNA biosynthesis.transcriptional activation.C2C2...	0.07	OrthoFinder output from all 47 species
AT3G50870	HAN, MNP, GATA18	GATA type zinc finger transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT4G36240	GATA7	GATA transcription factor 7	0.03	OrthoFinder output from all 47 species
AT5G49300	GATA16	GATA transcription factor 16	0.03	OrthoFinder output from all 47 species
AT5G56860	GNC, GATA21	GATA type zinc finger transcription factor family protein	0.04	OrthoFinder output from all 47 species
Adi_g010084	GATA22, CGA1, GNL	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g043911	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g14739	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g15604	GATA6	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g01872	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g05872	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0087.g042307	GNC, GATA21	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g25774	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.01G120400.1	GATA22, CGA1,...	transcription factor *(A/B-GATA) & original description:...	0.02	OrthoFinder output from all 47 species
Dcu_g20454	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os12g42970.1	GATA4, LOC_Os12g42970	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Lfl_g03090	GATA15	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g27263	GATA17	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
MA_110551g0010	GNC, GATA21	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Msp_g05287	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g07741	GATA6	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g22942	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15675	GATA15	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g06827	GATA22, CGA1, GNL	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g54359	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g08124	No alias	transcription factor *(A/B-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g39003	No alias	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc12g008830.3.1	GNC, GATA21,...	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Tin_g10967	GNC, GATA21	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	HCCA
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1903825	organic acid transmembrane transport	IEP	HCCA
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	269	303

External Links

No external refs found!

Nbi_g02879 (GATA15)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation