Nbi_g00642 (ATCPO-I, LIN2, HEMF1)

Aliases : ATCPO-I, LIN2, HEMF1

Description : EC_1.3 oxidoreductase acting on CH-CH group of donor & original description: none

Gene families : OG0002326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002326_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g00642

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00226710	ATCPO-I, LIN2,...	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder output from all 47 species
AT1G03475	ATCPO-I, LIN2, HEMF1	Coproporphyrinogen III oxidase	0.07	OrthoFinder output from all 47 species
Aev_g05297	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.07	OrthoFinder output from all 47 species
Aev_g43140	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.04	OrthoFinder output from all 47 species
Aob_g24817	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.04	OrthoFinder output from all 47 species
Aop_g02120	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.06	OrthoFinder output from all 47 species
Cba_g13302	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.07	OrthoFinder output from all 47 species
Ceric.38G006300.1	ATCPO-I, LIN2,...	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000471.12	ATCPO-I, LIN2, HEMF1	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder output from all 47 species
Cre02.g092600	ATCPO-I, LIN2, HEMF1	Coenzyme metabolism.tetrapyrrol...	0.08	OrthoFinder output from all 47 species
Dde_g07551	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.04	OrthoFinder output from all 47 species
Dde_g09262	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Ehy_g19845	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
GSVIVT01015906001	ATCPO-I, LIN2, HEMF1	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder output from all 47 species
Len_g17505	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.02	OrthoFinder output from all 47 species
Lfl_g09131	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.02	OrthoFinder output from all 47 species
MA_393193g0010	ATCPO-I, LIN2, HEMF1	oxygen-dependent coproporphyrinogen III oxidase (HemF)	0.03	OrthoFinder output from all 47 species
MA_73740g0010	ATCPO-I, LIN2, HEMF1	oxygen-dependent coproporphyrinogen III oxidase (HemF)	0.03	OrthoFinder output from all 47 species
Mp3g17410.1	ATCPO-I, LIN2, HEMF1	oxygen-dependent coproporphyrinogen III oxidase (HemF)	0.12	OrthoFinder output from all 47 species
Msp_g01613	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.05	OrthoFinder output from all 47 species
Ore_g20475	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Pnu_g11220	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Pnu_g18858	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018497	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022123	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.05	OrthoFinder output from all 47 species
Sam_g07152	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.03	OrthoFinder output from all 47 species
Sam_g11968	No alias	EC_1.3 oxidoreductase acting on CH-CH group of donor &...	0.02	OrthoFinder output from all 47 species
Smo131328	ATCPO-I, LIN2, HEMF1	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder output from all 47 species
Solyc10g005110.3.1	ATCPO-I, LIN2,...	oxygen-dependent coproporphyrinogen III oxidase (HemF)	0.04	OrthoFinder output from all 47 species
Tin_g03888	ATCPO-I, LIN2, HEMF1	EC_1.3 oxidoreductase acTing on CH-CH group of donor &...	0.04	OrthoFinder output from all 47 species
Zm00001e006977_P001	ATCPO-I, LIN2,...	oxygen-dependent coproporphyrinogen III oxidase (HemF)	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004109	coproporphyrinogen oxidase activity	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
MF	GO:0008312	7S RNA binding	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0045047	protein targeting to ER	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
CC	GO:0048500	signal recognition particle	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001260	Coprogen_oxidase_aer	94	396

External Links

No external refs found!

Nbi_g00642 (ATCPO-I, LIN2, HEMF1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation