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  5. Ehy_g19064

Ehy_g19064


Description : mRNA endoribonuclease *(G3BP) & original description: none


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g19064
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00228400 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g056110 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23469 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09378 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.39G021400.1 Ceric.39G021400 mRNA endoribonuclease *(G3BP) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g00907 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16246 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g00780 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027918001 No alias No description available 0.02 OrthoFinder output from all 47 species
Msp_g21351 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00599 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09583 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15548 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g059310.3.1 Solyc09g059310 mRNA endoribonuclease (G3BP) 0.03 OrthoFinder output from all 47 species
Zm00001e007583_P003 Zm00001e007583 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
Zm00001e038048_P001 Zm00001e038048 mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002075 NTF2_dom 17 135
IPR000504 RRM_dom 317 382
No external refs found!