1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g111210

Adi_g111210


Description : nuclear-encoded organellar RNA polymerase *(NEP) & original description: none


Gene families : OG0002420 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002420_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g111210

Target Alias Description ECC score Gene Family Method Actions
Aob_g40349 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene57353.t1 Aspi01Gene57353 nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0306.g063951 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Dde_g12005 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Gb_02899 MGP3 nuclear-encoded organellar RNA polymerase (NEP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g07120.1 LOC_Os09g07120 nuclear-encoded organellar RNA polymerase (NEP) 0.02 OrthoFinder output from all 47 species
Lfl_g09946 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Ppi_g33572 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR029262 RPOL_N 198 525
No external refs found!