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  5. Adi_g109494

Adi_g109494


Description : clathrin uncoating protein *(AUL) & original description: none


Gene families : OG0000516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000516_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g109494

Target Alias Description ECC score Gene Family Method Actions
AT1G75100 JAC1 J-domain protein required for chloroplast accumulation response 1 0.05 OrthoFinder output from all 47 species
Ala_g07110 No alias clathrin uncoating protein *(AUL) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13965 No alias clathrin uncoating protein *(AUL) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54455 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17543 No alias clathrin uncoating protein *(AUL) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene12683.t1 Aspi01Gene12683 clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50602.t1 Aspi01Gene50602 clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52095.t2 Aspi01Gene52095 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25925 No alias clathrin uncoating protein *(AUL) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29681 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g32857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G078100.1 Ceric.03G078100 clathrin uncoating protein *(AUL) & original... 0.04 OrthoFinder output from all 47 species
Ceric.07G045400.1 Ceric.07G045400 clathrin uncoating protein *(AUL) & original... 0.04 OrthoFinder output from all 47 species
Dde_g22628 No alias clathrin uncoating protein *(AUL) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26361 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g10180.1 JAC1, LOC_Os03g10180 actin filament reorganisation factor (JAC1). clathrin... 0.05 OrthoFinder output from all 47 species
Lfl_g35886 No alias clathrin uncoating protein *(AUL) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g14948 No alias clathrin uncoating protein *(AUL) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39833 No alias clathrin uncoating protein *(AUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59853 No alias clathrin uncoating protein *(AUL) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010037 No alias clathrin uncoating protein *(AUL) & original... 0.02 OrthoFinder output from all 47 species
Smo447002 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Zm00001e038789_P003 JAC1, Zm00001e038789 actin filament reorganisation factor (JAC1). clathrin... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!