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  5. Adi_g108892

Adi_g108892 (pde194)


Aliases : pde194

Description : methionyl-tRNA formyltransferase & original description: none


Gene families : OG0004687 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004687_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g108892

Target Alias Description ECC score Gene Family Method Actions
AT1G66520 pde194 formyltransferase, putative 0.02 OrthoFinder output from all 47 species
Als_g19799 pde194 methionyl-tRNA formyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Cre12.g560550 pde194 Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Pir_g12072 pde194 methionyl-tRNA formyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026475 pde194 methionyl-tRNA formyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Smo173020 pde194 Protein biosynthesis.organelle translation... 0.05 OrthoFinder output from all 47 species
Solyc02g091290.3.1 pde194, Solyc02g091290 methionyl-tRNA formyltransferase 0.03 OrthoFinder output from all 47 species
Spa_g10295 pde194 methionyl-tRNA formyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13783 pde194 methionyl-tRNA formyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020129_P004 pde194, Zm00001e020129 methionyl-tRNA formyltransferase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004814 arginine-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006420 arginyl-tRNA aminoacylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
MF GO:0008193 tRNA guanylyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005793 Formyl_trans_C 268 382
IPR002376 Formyl_transf_N 54 223
No external refs found!