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  5. Ehy_g17758

Ehy_g17758


Description : pre-mRNA-processing protein *(LUC7) & original description: none


Gene families : OG0004423 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004423_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g17758

Target Alias Description ECC score Gene Family Method Actions
Adi_g020534 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103452 No alias pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10910 UNE6 pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12075 UNE6 pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00719 UNE6 pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g39300.1 LOC_Os02g39300 pre-mRNA-processing protein (LUC7) 0.02 OrthoFinder output from all 47 species
Lfl_g09785 UNE6 pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species
MA_79834g0010 UNE6 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g03530.1 UNE6 pre-mRNA-processing protein (LUC7) 0.02 OrthoFinder output from all 47 species
Pir_g11730 UNE6 pre-mRNA-processing protein *(LUC7) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014772 UNE6 pre-mRNA-processing protein *(LUC7) & original... 0.03 OrthoFinder output from all 47 species
Spa_g56622 UNE6 pre-mRNA-processing protein *(LUC7) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA Interproscan
CC GO:0005685 U1 snRNP IEA Interproscan
BP GO:0006376 mRNA splice site selection IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004882 Luc7-rel 209 326
IPR004882 Luc7-rel 2 175
No external refs found!