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  5. Ehy_g16700

Ehy_g16700 (DegP9)


Aliases : DegP9

Description : protease *(Deg) & original description: none


Gene families : OG0000580 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000580_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g16700
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Als_g10404 DegP9 protease *(Deg) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07632 DegP10 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17389 DegP9 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g11110.1 DegP10 protease (Deg) 0.03 OrthoFinder output from all 47 species
Ore_g18107 DegP10 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09027 DegP10 protease *(Deg) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031683_P001 DegP10, Zm00001e031683 protease (Deg) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR001478 PDZ 427 528
IPR017956 AT_hook_DNA-bd_motif 94 105
IPR017956 AT_hook_DNA-bd_motif 130 139
IPR041517 DEGP_PDZ 535 680
No external refs found!