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  5. Adi_g084011

Adi_g084011 (PRA1.B4)


Aliases : PRA1.B4

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g084011

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene35142.t1 PRA1.B4, Aspi01Gene35142 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67192 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020828.4 PRA1.G1 Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Nbi_g06102 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g05606 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g097230.4.1 PRA1.E, Solyc01g097230 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species
Tin_g18034 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0007265 Ras protein signal transduction IEP HCCA
BP GO:0007266 Rho protein signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0018142 protein-DNA covalent cross-linking IEP HCCA
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 35 176
No external refs found!