1. Home
  2. Species
  3. Actinostachys digitata
  4. Sequence
  5. Adi_g077533

Adi_g077533


Description : not classified & original description: none


Gene families : OG0006966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006966_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Adi_g077533
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT5G27560 No alias Domain of unknown function (DUF1995) 0.07 OrthoFinder output from all 47 species
Ala_g08571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12407 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g01441 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g02501 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aspi01Gene13190.t1 Aspi01Gene13190 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.05G027900.1 Ceric.05G027900 not classified & original description: pacid=50578393... 0.04 OrthoFinder output from all 47 species
Cre17.g739550 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g10999 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g11557 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g10598 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01000051001 No alias No description available 0.09 OrthoFinder output from all 47 species
Gb_35506 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g05390.1 LOC_Os06g05390 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g02743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01065 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g09254 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13866 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g34750 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pp3c1_23410V3.1 Pp3c1_23410 Domain of unknown function (DUF1995) 0.04 OrthoFinder output from all 47 species
Ppi_g63785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013514 No alias not classified & original description: CDS=70-1200 0.03 OrthoFinder output from all 47 species
Smo146755 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g098990.4.1 Solyc01g098990 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g04618 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g13914 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Zm00001e036513_P002 Zm00001e036513 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0030091 protein repair IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018962 DUF1995 128 336
No external refs found!